PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016651050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 255aa    MW: 28901.3 Da    PI: 7.8391
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016651050.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.3e-1285136155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +h  +Er+RR+++ + ++ Lr+ lP     + k  s ++ + ++v+YIk+Lq
  XP_016651050.1  85 KKIMHRDVERQRRQEMATLYASLRSQLPLE---YLKVQSISDHVHQTVNYIKHLQ 136
                     5789*************************9...7788*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.82E-782140No hitNo description
SuperFamilySSF474593.4E-1283155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.23384135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.7E-986153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-886136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.009390141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MDYIPSNTLQ FDQALQQADE LFQISXXXXX XHTTQENQAL PPTPSQDGRD LTCSPTSGQK  60
RKASISSSNI TFGEIDDEQN PKGNKKIMHR DVERQRRQEM ATLYASLRSQ LPLEYLKVQS  120
ISDHVHQTVN YIKHLQSNIQ ELHNNRDRLK RSCDISCSSS ASTAVTMENS LSPMKESVVL  180
VRPCKVGVEV VVNTPMKQRL PLSRLLEILK REGLSTISCI SAQVNEKLIY TIESQVSDGK  240
CIDMFELQQR LTKNL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009362828.11e-112PREDICTED: transcription factor bHLH120
TrEMBLM5W9P05e-86M5W9P0_PRUPE; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-43bHLH family protein